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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946934.1_cds_XP_016488868.1_79447
CDS Infomation

[gene=LOC107808816] [db_xref=GeneID:107808816] [protein=probable inactive shikimate kinase like 1, chloroplastic] [protein_id=XP_016488868.1] [location=join(12472..12622,13537..13583,13681..13735,13993..14065,14152..14239,14331..14413,14526..14649,14817..14895,14976..15040,15145..15213)] [gbkey=CDS]
Sequence

ATGAAACTATTCCAATTGCCTCAGCAATTGTGGCTGCAACAACCATACGCCGGCAAGTCC
CGCCATTCTCAGCCTCCTCATCTTCCTTATTCAATTCCCTCTCTCAGGCTCAAAATTCGC
ACCTTCGCACTTTCCGACCCTGGTGCTTCCGATTCCACAACCCAGGCCACTCAATTTGAT
CTTTCGTTAACCGTGAAGAGGAAAGCAGCAGAAATATCTCCAGACATGAAAGGAACTTGT
ATCTTCCTTGTTGGCTTAAACAGCTCCATCAAATCCAACTCGGGAAAACTTCTTGCAGAT
GCACTGCGCTATTATTATTTTGACAGTGACAGTGTCGTTGAAGAAGCTTTGGGAGGAAAG
GATGCTGTCAGGTCATTTGTGAAGACAGACTTGAAGGGCTTTCGAGACTCAGAAACAGAG
GTACTGAAGCAGTTATCGTCCATGGGTCGCCTTGTTGTTGGTGCTGGGAATGGTGCGGTT
CAGCGTGCAGCTAATCTGGCGCTTATGAGACACGGCATATCAATATGGATCGACGTCCCC
TTGGATATGGTAGCCAAGGAAATTGTGGAGGAGAGTTTTCAACCTCCTGCTGCTGAAACA
ATACAAGGATCATATCCCGAGGTGTTGACTCAATTAACTGCTATTTATGAAGAAAGCCGT
AAGGGATATGCTACAGCTGATACAACTATTGCACTCCAGAAGGTTGCTTCTCGGTTAGGC
TATGATACATTAGATGCAGTAACCGCAGAGGATATGGTTTTGGAGACTCTGAAGGAGATA
GAGAGATTGATGAGAGTAAAGAAGTTGATGGAAGAAGCTGCCAGGCCATTTTAG

Peptide Sequence

PEP ID

XP_016488868.1
PEP Infomation

PREDICTED: probable inactive shikimate kinase like 1, chloroplastic [Nicotiana tabacum]
Sequence

MKLFQLPQQLWLQQPYAGKSRHSQPPHLPYSIPSLRLKIRTFALSDPGASDSTTQATQFD
LSLTVKRKAAEISPDMKGTCIFLVGLNSSIKSNSGKLLADALRYYYFDSDSVVEEALGGK
DAVRSFVKTDLKGFRDSETEVLKQLSSMGRLVVGAGNGAVQRAANLALMRHGISIWIDVP
LDMVAKEIVEESFQPPAAETIQGSYPEVLTQLTAIYEESRKGYATADTTIALQKVASRLG
YDTLDAVTAEDMVLETLKEIERLMRVKKLMEEAARPF

Transcript Sequence

Gene sequence data has not been registered.